Autolinking for scholarly identifiers
Implemented as a liquid filter for the Jekyll static website generator. Add jekyll-scholmd.rb to the _pluginsfolder of your Jekyll site and include {{ content | to_scholmd }} in your template, e.g. default.html.
Currently supported identifiers:
- IGSN. International Geosample Number
- MGI identifiers for genetically modified mouse strains in the Internal Mouse Strain Resource
- ENA. Genbank / ENA / DDBJ nucleotide sequences
- UniProt protein sequences from the UniProt database
- PDB. Protein Data Bank protein structure information
Please open an issue for additional identifiers and/or improvements in the regex patterns used.
The software is released under a MIT license.